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2'-Deoxy-2'-fluoroguanosine (2'-deoxy-2'-fluoroguanosine; 2'-fluorodeoxyguanosine; 2'-fluoro-2'-deoxyguanosine)

Cat No.:V53068 Purity: ≥98%
2′-Deoxy-2′-fluoroguanosine, a nucleoside analog, is a potent inhibitor of influenza virus, with an EC90 value of <0.35 μM for influenza A and B viruses.
2'-Deoxy-2'-fluoroguanosine (2'-deoxy-2'-fluoroguanosine; 2'-fluorodeoxyguanosine; 2'-fluoro-2'-deoxyguanosine)
2'-Deoxy-2'-fluoroguanosine (2'-deoxy-2'-fluoroguanosine; 2'-fluorodeoxyguanosine; 2'-fluoro-2'-deoxyguanosine) Chemical Structure CAS No.: 78842-13-4
Product category: Influenza Virus
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
2′-Deoxy-2′-fluoroguanosine, a nucleoside analog, is a potent inhibitor of influenza virus, with an EC90 value of <0.35 μM for influenza A and B viruses. 2′-Deoxy-2′-fluoroguanosine significantly inhibits influenza virus replication in the upper respiratory tract, thereby improving fever and nasal inflammation.
2'-Deoxy-2'-fluoroguanosine (CAS# 78842-13-4) is a synthetic purine nucleoside analog in which the 2'-hydroxyl of the deoxyribose sugar is replaced with a fluorine atom. With a molecular formula of C10H12FN5O4 and molecular weight of 285.23, this compound is an inhibitor of influenza virus replication in the upper respiratory tract, improving fever and nasal inflammation. It is an influenza viral polymerase inhibitor like Ribavirin, used as an antiviral drug against avian (H5N1) influenza virus. 2'-Deoxy-2'-fluoroguanosine significantly inhibits replication of influenza virus in the upper respiratory tract.
Biological Activity I Assay Protocols (From Reference)
Targets
EC90: <0.35 μM (influenza virus A and B)[1]
2'-Deoxy-2'-fluoroguanosine is an influenza viral polymerase inhibitor. As a nucleoside analog, it mimics guanosine structure and is incorporated into viral RNA during replication, leading to chain termination or mutagenesis. The compound inhibits influenza A and B viruses with EC90 values <0.35 μM. The mechanism of action involves its incorporation into oligonucleotides, which then exhibit high affinity and specificity for RNA targets. The 2'-fluoro modification enhances metabolic stability and binding affinity to the viral polymerase.
ln Vitro
2'-Deoxy-2'-fluoroguanosine demonstrates potent in vitro antiviral activity against influenza A and B viruses with EC90 values <0.35 μM. It is an influenza viral polymerase inhibitor like Ribavirin. The compound inhibits viral replication through incorporation into viral RNA, leading to chain termination or mutagenesis. The 2'-fluoro modification enhances the compound's stability and binding affinity to the viral polymerase. Detailed IC50 values and spectrum of activity are available in the antiviral research literature.
ln Vivo
2'-Deoxy-2'-fluoroguanosine significantly inhibits replication of influenza virus in the upper respiratory tract, resulting in amelioration of fever and nasal inflammation in animal models. The compound demonstrates in vivo efficacy against avian (H5N1) influenza virus. As a nucleoside analog, it is incorporated into viral RNA and inhibits viral replication. The compound's efficacy in the upper respiratory tract makes it a promising candidate for the treatment of influenza infections.
Enzyme Assay
For influenza virus polymerase inhibition assays, purified influenza virus polymerase is incubated with viral RNA template, nucleotides (including radiolabeled or fluorescently labeled nucleotides), and 2'-Deoxy-2'-fluoroguanosine at various concentrations. Polymerase activity is measured by incorporation of labeled nucleotides into RNA products, which are analyzed by gel electrophoresis or scintillation counting. IC50 or EC90 values are calculated from dose-response curves. For antiviral assays, virus-infected cells are treated with the compound and viral replication is assessed by plaque reduction or qRT-PCR.
Cell Assay
For antiviral activity evaluation, MDCK or other susceptible cells are cultured in appropriate media and infected with influenza virus at a suitable multiplicity of infection. Cells are treated with 2'-Deoxy-2'-fluoroguanosine at various concentrations (typically 0.001-100 μM) for 24-48 hours post-infection. Viral replication is assessed by plaque reduction assays, where infected cells are overlayed with agarose containing the compound and plaques are counted after staining. Alternatively, viral RNA is quantified by qRT-PCR, or viral protein expression is assessed by immunofluorescence. Cytotoxicity is assessed in parallel using MTT assays.
Animal Protocol
For in vivo efficacy studies, mice are infected with influenza virus (e.g., H5N1) intranasally. 2'-Deoxy-2'-fluoroguanosine is administered by appropriate routes (oral, intraperitoneal, or intranasal) at various doses. Survival is monitored, and body weight is measured daily. At study termination, viral titers in lung and upper respiratory tract tissues are determined by plaque assay or qRT-PCR. Fever and nasal inflammation are assessed as clinical endpoints. Pharmacokinetic studies are conducted to determine compound exposure in plasma and respiratory tissues.
ADME/Pharmacokinetics
Pharmacokinetic properties of 2'-Deoxy-2'-fluoroguanosine have been characterized in preclinical studies. The compound has a molecular weight of 285.23 and is a nucleoside analog with moderate water solubility. As a nucleoside analog, it is expected to be phosphorylated intracellularly to the active triphosphate form. The 2'-fluoro modification enhances metabolic stability by reducing susceptibility to nucleoside phosphorylases. Detailed PK parameters including bioavailability, half-life, and tissue distribution are available in the primary literature.
Toxicity/Toxicokinetics
2'-Deoxy-2'-fluoroguanosine is a research compound intended for laboratory use only and is not approved for human therapeutic use. As an influenza viral polymerase inhibitor, it has demonstrated activity against avian (H5N1) influenza virus. The compound significantly inhibits replication of influenza virus in the upper respiratory tract. Standard laboratory safety precautions should be followed when handling this compound. Toxicological studies have been conducted as part of preclinical development.
References

[1]. Inhibition of influenza virus transcription by 2'-deoxy-2'-fluoroguanosine. Antimicrob Agents Chemother. 1995 Nov;39(11):2454-8.

[2]. Efficacy of 2'-deoxy-2'-fluororibosides against influenza A and B viruses in ferrets. Antimicrob Agents Chemother. 1994 Aug;38(8):1864-7.

Additional Infomation
2'-Deoxy-2'-fluoroguanosine is a synthetic purine nucleoside analog with molecular formula C10H12FN5O4 and molecular weight 285.23. It is an influenza viral polymerase inhibitor with EC90 values <0.35 μM against influenza A and B viruses. The compound significantly inhibits influenza virus replication in the upper respiratory tract, improving fever and nasal inflammation. It is active against avian (H5N1) influenza virus. The compound is for research use only and has not been approved for clinical applications.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C10H12FN5O4
Molecular Weight
285.23
Exact Mass
285.087
CAS #
78842-13-4
PubChem CID
135415565
Appearance
White to off-white solid powder
Density
2.2±0.1 g/cm3
Index of Refraction
1.876
LogP
-0.53
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
2
Heavy Atom Count
20
Complexity
449
Defined Atom Stereocenter Count
4
SMILES
C1=NC2=C(N1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)F)N=C(NC2=O)N
InChi Key
UXUZARPLRQRNNX-DXTOWSMRSA-N
InChi Code
InChI=1S/C10H12FN5O4/c11-4-6(18)3(1-17)20-9(4)16-2-13-5-7(16)14-10(12)15-8(5)19/h2-4,6,9,17-18H,1H2,(H3,12,14,15,19)/t3-,4-,6-,9-/m1/s1
Chemical Name
2-amino-9-[(2R,3R,4R,5R)-3-fluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1H-purin-6-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 50 mg/mL (175.30 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (8.76 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (8.76 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (8.76 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5059 mL 17.5297 mL 35.0594 mL
5 mM 0.7012 mL 3.5059 mL 7.0119 mL
10 mM 0.3506 mL 1.7530 mL 3.5059 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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