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Amino-PEG4-GGFG-Dxd

Amino-PEG4-GGFG-Dxd (Compound 13-7) is a drug-linker conjugate composed of Dxd and linker, which can be used for the synthesis of ADC.
Amino-PEG4-GGFG-Dxd
Amino-PEG4-GGFG-Dxd Chemical Structure CAS No.: 2879227-88-8
Product category: Drug-Linker Conjugates for ADC
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Amino-PEG4-GGFG-Dxd (Compound 13-7) is a drug-linker conjugate composed of Dxd and linker, which can be used for the synthesis of ADC.
Amino-PEG4-GGFG-Dxd (Compound 13-7) is a drug-linker conjugate for ADCs. It consists of the potent topoisomerase I inhibitor Dxd (a key component of Enhertu), linked to a hydrophilic PEG4 spacer and a GGFG tetrapeptide (Gly-Gly-Phe-Gly) linker. This design provides an enzymatically cleavable, high-DAR payload.
Biological Activity I Assay Protocols (From Reference)
Targets
Topoisomerase I. Dxd is a derivative of exatecan that acts as a topoisomerase I inhibitor, trapping the DNA-topoisomerase I complex and leading to irreversible DNA damage and apoptosis in rapidly dividing cells.
ln Vitro
In cell-free assays, the GGFG linker is specifically cleaved by lysosomal proteases (e.g., cathepsin B) but remains stable in plasma. When incorporated into an ADC, the conjugate releases the Dxd payload intracellularly. The payload then diffuses to the nucleus to exert its cytotoxic effect by inhibiting topoisomerase I.
ln Vivo
In vivo, when conjugated to a tumor-targeting antibody, the drug-linker conjugate significantly inhibits tumor growth in mouse xenograft models and can induce complete tumor regression. The hydrophilic PEG4 spacer increases the aqueous solubility of the ADC, allowing for higher drug-to-antibody ratios (DAR) without aggregation.
Enzyme Assay
A general cell‑free protocol for a drug-linker conjugate: The compound is first conjugated to an antibody via maleimide-thiol chemistry. The resulting ADC is purified and analyzed to confirm its drug-to-antibody ratio (DAR). The ADC is then evaluated in a cell-free stability assay by incubation in human plasma at 37degC for 14 days, and intact ADC levels are measured by LC-MS.
Cell Assay
A general cellular protocol for the ADC: Target-positive cancer cells (e.g., HER2-expressing cells) are plated in 96-well plates. The ADC is added in serial dilutions, and after 72-96 hours, cell viability is determined using a luminescent CellTiter-Glo assay. The half-maximal inhibitory concentration (IC50) is calculated.
Animal Protocol
A general animal protocol for the ADC: Mice bearing subcutaneous xenografts of target-positive tumors are intravenously administered the ADC at doses of 1, 3, or 10 mg/kg. Tumor volume is measured with a caliper twice weekly. On study completion, tumors are collected for IHC and assessment of DNA damage (gamma-H2AX).
ADME/Pharmacokinetics
General PK protocol: The ADC is administered intravenously to rats or cynomolgus monkeys. Blood is collected over 28 days. Plasma samples are analyzed using ligand-binding assays (e.g., ELISA) to measure total antibody concentrations and Dxd-conjugated antibody concentrations. The released payload is analyzed by LC-MS/MS.
Toxicity/Toxicokinetics
General toxicity protocol: A 28-day repeat-dose IV toxicity study is performed in cynomolgus monkeys. Animals are administered the ADC at doses of 5, 20, or 60 mg/kg once weekly. Parameters include clinical signs, body weight, hematology, serum chemistry, and histopathology of the bone marrow, gastrointestinal tract, and liver.
References

[1]. Chemical coupling linker and use thereof. Patent. WO2022253033

Additional Infomation
Dxd is the cytotoxic component of the clinically approved ADC Enhertu (trastuzumab deruxtecan). The GGFG tetrapeptide linker is designed for cathepsin B-mediated cleavage, ensuring efficient payload release in the lysosomal compartment. Amino-PEG4-GGFG-Dxd has a molecular formula C53H66FN9O15 and a molecular weight of 1088.14 g/mol.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Exact Mass
1087.466
CAS #
2879227-88-8
PubChem CID
171714382
Appearance
Solid powder
Hydrogen Bond Donor Count
8
Rotatable Bond Count
30
Heavy Atom Count
78
Complexity
2200
Defined Atom Stereocenter Count
3
InChi Key
SCJCAOCGTRKMQY-KJDBIWOKSA-N
InChi Code
InChI=1S/C53H66FN9O15/c1-3-53(72)36-22-41-49-34(27-63(41)51(70)35(36)28-78-52(53)71)48-38(10-9-33-31(2)37(54)23-39(62-49)47(33)48)60-46(68)29-77-30-59-44(66)25-58-50(69)40(21-32-7-5-4-6-8-32)61-45(67)26-57-43(65)24-56-42(64)11-13-73-15-17-75-19-20-76-18-16-74-14-12-55/h4-8,22-23,38,40,72H,3,9-21,24-30,55H2,1-2H3,(H,56,64)(H,57,65)(H,58,69)(H,59,66)(H,60,68)(H,61,67)/t38-,40-,53-/m0/s1
Chemical Name
(2S)-2-[[2-[[2-[3-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]propanoylamino]acetyl]amino]acetyl]amino]-N-[2-[[2-[[(10S,23S)-10-ethyl-18-fluoro-10-hydroxy-19-methyl-5,9-dioxo-8-oxa-4,15-diazahexacyclo[14.7.1.02,14.04,13.06,11.020,24]tetracosa-1,6(11),12,14,16,18,20(24)-heptaen-23-yl]amino]-2-oxoethoxy]methylamino]-2-oxoethyl]-3-phenylpropanamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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