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GS-646089

Cat No.:V136946 Purity: ≥98%
GS-646089 is a broad-spectrum antiviral nucleoside analog that exhibits significant inhibitory activity against respiratory syncytial virus (RSV), human metapneumovirus (hMPV), rhinovirus (enterovirus), and enteroviruses.
GS-646089
GS-646089 Chemical Structure CAS No.: 1770840-57-7
Product category: RSV
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
1g
Other Sizes
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Product Description
GS-646089 is a broad-spectrum antiviral nucleoside analogue with significant inhibitory activity against respiratory syncytial virus (RSV), human metapneumovirus (hMPV), rhinovirus (enterovirus), and enteroviruses. GS-646089 targets RNA-dependent RNA polymerase (RdRp) with an IC50 value ranging from 43 to 46 nM. GS-646089 blocks viral replication by converting into a triphosphate metabolite within cells, which competes with ATP for incorporation into nascent RNA chains, thus acting as a direct chain terminator. GS-646089 is the parent compound of the dual prodrug GS-7682 (7), used to investigate acute respiratory viral infections and infections caused by related pathogens.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
GS-646089 (compound 2) can inhibit RSV replication in primary NHBE cells and HEp-2 cells, with EC50 values of 6.23 μM and 6.83 μM, respectively; in addition, it has no cytotoxicity to HEp-2 cells and MT4 cells at concentrations up to 50 μM[1]. The active triphosphate metabolite (2-NTP) of GS-646089 can effectively inhibit RSV RNP complex, with an IC50 value of 0.050 μM, and has high selectivity for human mitochondrial polymerase and DNA polymerase[1]. GS-646089 can effectively inhibit the enzymatic activity of cell-free RSV-A2 RNP complex and RdRp, with IC50 values of 46 nM and 43 nM, respectively[2]. GS-646089 inhibited RSV replication in NHBE cells with an EC50 of approximately 2–7 μM and showed no cytotoxicity at concentrations up to 50 μM [3]. GS-646089 also inhibited RSV replication in HEp-2 cells with an EC50 of approximately 2–7 μM; it showed no cytotoxicity in HEp-2 or MT4 cells even at the highest concentration of 50 μM [3]. The low levels of intracellular active 2-NTP metabolites produced by GS-646089 (10 μM; 2 h) suggest that the initial phosphorylation of this nucleoside is limited [3].
ln Vivo
GS-646089 (compound 2) (1.6-7.6 mg/kg; inhalation; once daily; 6 days) is the active metabolite of inhaled GS-7682, which can reduce the RSV viral load in the bronchoalveolar lavage fluid (BALF) of African green monkeys infected with respiratory syncytial virus (RSV) by an average of 3.6 log10 and significantly inhibit the replication of the virus in the lower respiratory tract [1]. GS-646089 (1.6-7.6 mg/kg; nebulized inhalation; once daily; 6 days) can reduce the RSV A2 viral load in the BALF of African green monkeys by an average of 3.6 log10 on day 5 post-infection, and the viral load continues to decrease until day 11 compared with the solvent control group [3].
Animal Protocol
Animal/Disease Models:African Green Monkeys (infected with RSV A2 on day 0) [1]
Doses: 1.6 mg/kg; 7.6 mg/kg
Route of Administration: Once daily for 6 days
Experimental Results: High levels of active GS-646089 metabolites (2-NTPs) were detected in lung tissue. Compared with the vector control group, the viral load in bronchoalveolar lavage fluid (BAL) was reduced by an average of 3.6 log10 on day 5. RSV RNA copy number was significantly reduced in BAL samples collected from day 3 to 11 post-infection. Moderate viral rebound occurred 2 to 4 days after the last dose, but the viral load in the treated African Green Monkeys remained low on day 11. No statistically significant reduction in viral load was observed in nasal swabs.
Animal/Disease Models:African green monkey [3]
Doses: 1.6 mg/kg; 7.6 mg/kg
Route of Administration: Intratracheal nebulization; once daily for 6 days
Experimental Results: Compared with the vector control group, the viral load in bronchoalveolar lavage fluid (BAL) decreased by an average of 3.6 log10 on day 5 post-infection. Respiratory syncytial virus (RSV) RNA copy number was significantly reduced in BAL samples collected from day 3 to 11 post-infection. A moderate rebound in BAL viral load occurred 2–4 days after the last administration, but the viral load remained lower than that in the vector control group until day 11. No statistically significant reduction in viral load was observed in nasal swab samples.
References

[1]. Discovery and Synthesis of GS-7682, a Novel Prodrug of a 4′-CN-4-Aza-7, 9-Dideazaadenosine C-Nucleoside with Broad-Spectrum Potency Against Pneumo-and Picornaviruses and Efficacy in RSV-Infected African Green Monkeys[J]. bioRxiv, 2024: 2024.04. 17.589937.

[2]. Prodrug strategies in developing antiviral nucleoside analogs. RSC Med Chem. 2026;17(1):105-131. Published 2026 Jan 2.

[3]. Discovery of GS-7682, a Novel 4'-Cyano-Modified C-Nucleoside Prodrug with Broad Activity against Pneumo- and Picornaviruses and Efficacy in RSV-Infected African Green Monkeys. J Med Chem. 2024;67(15):12945-12968.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H13N5O4
Molecular Weight
291.26
CAS #
1770840-57-7
Appearance
Typically exists as solids at room temperature
SMILES
NC1=NC=NN2C1=CC=C2[C@H]3[C@H](O)[C@H](O)[C@](CO)(C#N)O3
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.4334 mL 17.1668 mL 34.3336 mL
5 mM 0.6867 mL 3.4334 mL 6.8667 mL
10 mM 0.3433 mL 1.7167 mL 3.4334 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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