BRD6989

Alias: BRD-6989; BRD6989; BRD 6989
Cat No.:V17001 Purity: ≥98%
BRD6989 is an analog of the naturally occurng cortistatin A (dCA), acting as a novel, potent and selective CDK8 inhibitor with an IC50 of ~200 nM.
BRD6989 Chemical Structure CAS No.: 642008-81-9
Product category: CDK
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

BRD6989 is an analog of the naturally occurng cortistatin A (dCA), acting as a novel, potent and selective CDK8 inhibitor with an IC50 of ~200 nM. BRD6989 requires an intact cyclin C-CDK8 complex in order to upregulate IL-10, a function that is recapitulated by several structurally distinct CDK8 and CDK19 inhibitors. BRD6989 showed a strong preference for CDK8 over CDK19. BRD6989 increased IL-10 production and inhibited STAT1 phosphorylation at S727 in bone marrow-derived dendritic cells, indicating that CDK8 functions as a negative regulator of IL-10 production during innate immune activation. For inflammatory conditions, BRD6989 might be helpful.

Biological Activity I Assay Protocols (From Reference)
Targets
CDK8 (IC50 ~200 nM); recombinant CDK8 (IC50 ~0.5 μM); recombinant CDK19 (IC50 >30 μM); IL-10
ln Vitro
Using BRD6989 (0-100 μM; 48 hours) to ablate BMDCs results in an EC50 trajectory of 1 μM for IL-10 production [1]. IFNγ-stimulated BMDCs are inhibited at Ser727 by BRD6989 (0.6, 1.7, 5, 15 μM). After stimulating BMDMs, BRD6989 (5 μM; ~2 hours) differentially suppresses STAT1–STAT2 activity and phosphorylation of the NF-κB activation domain [1]. BRD6989 (^2 hours; 5 µM). 24 hours) increases the synthesis of IL-10 and activator in mouse dendritic cells and macrophages [1].
References
[1]. Johannessen L, et al. Small-molecule studies identify CDK8 as a regulator of IL-10 in myeloid cells. Nat Chem Biol. 2017 Oct;13(10):1102-1108
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H16N4
Molecular Weight
264.332
Exact Mass
264.1375
Elemental Analysis
C, 72.70; H, 6.10; N, 21.20
CAS #
642008-81-9
Related CAS #
642008-81-9
Appearance
Solid powder
SMILES
CC1CCC2=C(C1)C(=C(C(=N2)N)C#N)C3=CN=CC=C3
InChi Key
QSYBDNXNOJIKML-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H16N4/c1-10-4-5-14-12(7-10)15(11-3-2-6-19-9-11)13(8-17)16(18)20-14/h2-3,6,9-10H,4-5,7H2,1H3,(H2,18,20)
Chemical Name
2-amino-6-methyl-4-pyridin-3-yl-5,6,7,8-tetrahydroquinoline-3-carbonitrile
Synonyms
BRD-6989; BRD6989; BRD 6989
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 25~30 mg/mL (94.6~113.5 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (7.87 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.7831 mL 18.9157 mL 37.8315 mL
5 mM 0.7566 mL 3.7831 mL 7.5663 mL
10 mM 0.3783 mL 1.8916 mL 3.7831 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • BRD6989 prioritized from phenotypic screen for small-molecule enhancers of IL-10 production. Nat Chem Biol . 2017 Oct;13(10):1102-1108.
  • CDK8 is a molecular target of BRD6989. Nat Chem Biol . 2017 Oct;13(10):1102-1108.
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